dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05423
Location and strand information: 30523 - 31074 (-)
Family: 3.A.1.210.2
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05424
Location and strand information: 31133 - 31663 (-)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05425
Location and strand information: 31680 - 32243 (-)
Family: 3.A.1.117.2
Protein type: TC
Protein description: Multidrug resistance ABC transporter ATP-binding and permease protein

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05426
Location and strand information: 32379 - 32648 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05427
Location and strand information: 32736 - 33047 (+)
Family: null
Protein type: null
Protein description: Thioredoxin C-1

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05428
Location and strand information: 33195 - 34118 (-)
Family: GH43_34|GH43_22|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8412
Protein molecular weight: 35165.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05429
Location and strand information: 34149 - 35123 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05430
Location and strand information: 35437 - 36903 (-)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 4.923
Protein molecular weight: 54976.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05431
Location and strand information: 36919 - 38244 (-)
Family: GH27|CBM51
Protein type: CAZyme
Protein description: Alpha-galactosidase A
Protein isoelectric point: 4.8768
Protein molecular weight: 50257.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05432
Location and strand information: 38382 - 39233 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002330_163|CGC1
Gene ID: MGYG000002330_05433
Location and strand information: 39686 - 42097 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 5.2101
Protein molecular weight: 90644.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002330_05423	Lipid A export ATP-binding/permease protein MsbA	TC	30523	31074	-	3.A.1.210.2
MGYG000002330_05424	putative ABC transporter ATP-binding protein	TC	31133	31663	-	3.A.1.135.5
MGYG000002330_05425	Multidrug resistance ABC transporter ATP-binding and permease protein	TC	31680	32243	-	3.A.1.117.2
MGYG000002330_05426	hypothetical protein	null	32379	32648	+	DUF1905
MGYG000002330_05427	Thioredoxin C-1	null	32736	33047	+	Thioredoxin
MGYG000002330_05428	hypothetical protein	CAZyme	33195	34118	-	GH43_34\| GH43_22\| GH43
MGYG000002330_05429	hypothetical protein	null	34149	35123	-	Transposase_31
MGYG000002330_05430	Alpha-galactosidase	CAZyme	35437	36903	-	GH4
MGYG000002330_05431	Alpha-galactosidase A	CAZyme	36919	38244	-	GH27\| CBM51
MGYG000002330_05432	HTH-type transcriptional activator RhaR	TF	38382	39233	+	HTH_AraC+HTH_AraC
MGYG000002330_05433	Beta-galactosidase BoGH2A	CAZyme	39686	42097	+	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature